BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B12LP1|AL428341
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1716 1746 0.0
>3x_Contig1716
Length = 19108
Score = 1746 bits (878), Expect = 0.0
Identities = 906/917 (98%), Gaps = 1/917 (0%)
Strand = Plus / Minus
Query: 1 gaacaggtaacttaagttaacgaaacctgttaatattgctctcgagaaaacagaggatat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14167 gaacaggtaacttaagtaaacgaaacctgttaatattgctctcgagaaaacagaggatat 14108
Query: 61 aagagaattggaagaaaccagttaggatatcttttacgtcatacttaggggacaaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14107 aagagaattggaagaaaccagttaggatatcttttacgtcatacttaggggacaaggtag 14048
Query: 121 atatcatctagatccagactatatcccatatcgtttaattttatcaaatattaaggaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14047 atatcatctagatccagactatatcccatatcgtttaattttatcaaatattaaggaatt 13988
Query: 181 ggaagtataaaagatgccatcagtggaagaaagtgtagctacaattaagtcagagttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13987 ggaagtataaaagatgccatcagtggaagaaagtgtagctacaattaagtcagagttgaa 13928
Query: 241 gtatttgaaggagccaggtgcattagcagagttagcatataaggatattgaatcgttgtt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13927 gtatttgaaggagcaaggtgcattagcagagttagcatataaggatattgaatcgttgtt 13868
Query: 301 accaagagtaagaccacaaccaccagtagcagatacgatgggtcaaaataacgagattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13867 accaagagtaagaccacaaccaccagtagcagatacgatgggtcaaaataacgagattgt 13808
Query: 361 ggaagcactatatgcatttcaaccacaacaggatggtgatttagctttgaaaccgggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13807 ggaagcactatatgcatttcaaccacaacaggatggtgatttagctttgaaaccgggaga 13748
Query: 421 taagatcgagatcttggaaaagttaagtcctgagtggtacaagggcaaatgcaatgntca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13747 taagatcgagatcttggaaaagttaagtcctgagtggtacaagggcaaatgcaatggtca 13688
Query: 481 agtcggtgtgttcccaagcmattatgtgaagtcagttgacacgaaagatgtcgaaaagag 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 13687 agtcggtgtgttcccaagcaattatgtgaagtcagttgacacgaaagatgtcgaaaagag 13628
Query: 541 aagctcttctgcmactccggttgcmaatctgcctcaatatgcggcatatactccacctgg 600
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13627 aagctcttctgcaactccggttgcaaatctgcctcaatatgcggcatatactccacctgg 13568
Query: 601 acagcagatgccagttcagccgccagttcaacaacaatcaccattcccaccacagtttac 660
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 13567 acagcagatgcaagttcagccgccagtacaacaacaatcaccattcccaccacagtttac 13508
Query: 661 cggttattaccagcaaccagtgcaacaacagccaatgcaacaataccctcaacagcagcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13507 cggttattaccagcaaccagtgcaacaacagccaatgcaacaataccctcaacagcagcc 13448
Query: 721 tcaagaacaacctcaagaacaaagcagttatcaaggctccgcagcatttaagaagttcgg 780
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 13447 tcaagaacaacctcaagaacaaagcagtcatcaaggctccgcagcatttaagaagttcgg 13388
Query: 781 aagtwaattgggaaatgctgccatttttggtgccggtgcca-cattggttctgatttggt 839
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 13387 aagtaaattgggaaatgctgccatttttggtgccggtgccaccattggttctgatttggt 13328
Query: 840 gaacagcatcttttagagatagttaatgccatgtttcttactaagaaattttgataaatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13327 gaacagcatcttttagagatagttaatgccatgtttcttactaagaaattttgataaatt 13268
Query: 900 taccttactaaggcaga 916
|||||||||||||||||
Sbjct: 13267 taccttactaaggcaga 13251
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6415
Number of Sequences: 1807
Number of extensions: 6415
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)